Microbial Source Tracking

Presents a state-of-the-art review of the current technology and applications being utilized to identify sources of fecal contamination in waterways. - Serves as a useful reference for researchers in the food industry, especially scientists investigating etiological agents responsible for food contamination. - Provides background information on MST methods and the assumptions and limitations associated with their use. - Covers a broad range of topics related to MST, including environmental monitoring, public health and national security, population biology, and microbial ecology. - Offers valuable insights into future research directions and technology developments.

Understanding the origin of fecal pollution is essential in assessing potential health risks as well as for determining the actions necessary to remediate the quality of waters contaminated by fecal matter. As a result, microbial source tracking (MST) has emerged as a field that has evolved and diversified rapidly since the first approaches were described only a decade ago. In response to the emergence of MST, there have been three large multi-laboratory method comparison studies (two in the US and one in Europe), plus numerous workshops, book chapters, and review articles dedicated to synthesizing information on the topic. Furthermore, a federal (USEPA) guide document describing the uses and limitations of MST methods was published in 2005, and a book dedicated to MST as an emerging issue in food safety was published in 2007. These documents provide a collective body of literature on MST that is both conflicting and complementary, often repetitious, and difficult to condense and interpret. In addition, it does not reflect the current diversity of MST approaches with different organisms, newer methodologies such as quantitative PCR, and anthropogenic chemicals, nor does it embrace the scope of MST research being conducted around the world. The three editors of the book, all with extensive MST expertise, have developed chapters and invited authors who reflect the rich diversity and truly international scope of MST. The unifying theme throughout the book is the design of more standardized approaches to MST that include performance criteria (regardless of method or organism), plus recommendations for field study design and MST implementation. The editors intend that this book will serve as a valuable reference for all those who are involved with

Understanding the origin of fecal pollution is essential in assessing potential health risks as well as for determining the actions necessary to remediate the quality of waters contaminated by fecal matter. As a result, microbial source tracking (MST) has emerged as a field that has evolved and diversified rapidly since the first approaches were described only a decade ago. In response to the emergence of MST, there have been three large multi-laboratory method comparison studies (two in the US and one in Europe), plus numerous workshops, book chapters, and review articles dedicated to synthesizing information on the topic. Furthermore, a federal (USEPA) guide document describing the uses and limitations of MST methods was published in 2005, and a book dedicated to MST as an emerging issue in food safety was published in 2007. These documents provide a collective body of literature on MST that is both conflicting and complementary, often repetitious, and difficult to condense and interpret. In addition, it does not reflect the current diversity of MST approaches with different organisms, newer methodologies such as quantitative PCR, and anthropogenic chemicals, nor does it embrace the scope of MST research being conducted around the world. The three editors of the book, all with extensive MST expertise, have developed chapters and invited authors who reflect the rich diversity and truly international scope of MST. The unifying theme throughout the book is the design of more standardized approaches to MST that include performance criteria (regardless of method or organism), plus recommendations for field study design and MST implementation. The editors intend that this book will serve as a valuable reference for all those who are involved with

Provides the latest QMRA methodologies to determine infection risk cause by either accidental microbial infections or deliberate infections caused by terrorism • Reviews the latest methodologies to quantify at every step of the microbial exposure pathways, from the first release of a pathogen to the actual human infection • Provides techniques on how to gather information, on how each microorganism moves through the environment, how to determine their survival rates on various media, and how people are exposed to the microorganism • Explains how QMRA can be used as a tool to measure the impact of interventions and identify the best policies and practices to protect public health and safety • Includes new information on genetic methods • Techniques use to develop risk models for drinking water, groundwater, recreational water, food and pathogens in the indoor environment

Wastewater Microbiology focuses on microbial contaminants found in wastewater, methods of detection for these contaminants, and methods of cleansing water of microbial contamination. This classic reference has now been updated to focus more exclusively on issues particular to wastewater, with new information on fecal contamination and new molecular methods. The book features new methods to determine cell viability/activity in environmental samples; a new section on bacterial spores as indicators; new information covering disinfection byproducts, UV disinfection, and photoreactivation; and much more. A PowerPoint of figures from the book is available at ftp://ftp.wiley.com/public/sci_tech_med/wastewater_microbiology.

A wide range of microbiologists, molecular biologists, and molecular evolutionary biologists will find this new volume of singular interest. It summarizes the present knowledge about the structure and stability of microbial genomes, and reviews the techniques used to analyze and fingerprint them. Maps of approximately thirty important microbes, along with articles on the construction and relevant features of the maps are included. The volume is not intended as a complete compendium of all information on microbial genomes, but rather focuses on approaches, methods and good examples of the analysis of small genomes.

Fecal pollution is a primary concern for recreational water bodies in US. The current water quality criteria are based on the cultivability of fecal indicator bacteria like E. coli and enterococci. These indicators are ubiquitous in the digestive tract of warm-blooded animals but are also known to persist and even multiply in the environment given favorable conditions. Hence their presence does not provide information on the sources of fecal contamination. In the past decade microbial source tracking (MST), the research area that uses host-specific microbes to identify the sources of fecal pollution, has undergone rapid development. A brief historical overview is provided in Chapter 1 and state-of-the art methods are presented and analyzed in Chapter 2. Quantitative PCR (qPCR)-based MST methods have been widely used for two reasons: they can detect both cultivable and uncultivable microbes and their process time is shorter comparing to other MST methods. The results from qPCR reactions need to be further processed to achieve quantitative MST because of analytical complications caused by the environmental water matrix. Two of the most important aspects will be addressed in Chapters 3 and 4. Chapter 3 attempts to solve the imperfect specificity and sensitivity of the qPCR assays with a statistical procedure that evaluates the impact of false positive/negative information. Chapter 4 addresses the inaccuracy in qPCR data analysis caused by the high noise signal and inconsistent amplification efficiency frequently seen in environmental water samples. Corrective measures are proposed to improve the accuracy of estimated DNA concentrations.